STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB32372.1PFAM: Polyketide cyclase / dehydrase and lipid transport. (139 aa)    
Predicted Functional Partners:
AGB30921.1
Hypothetical protein.
  
     0.643
AGB30719.1
PFAM: HTH DNA binding domain.
  
     0.596
AGB32552.1
Hypothetical protein.
  
     0.579
AGB33352.1
PFAM: HTH DNA binding domain.
  
     0.575
AGB32373.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.562
AGB31072.1
Hypothetical protein.
  
     0.552
AGB32365.1
PFAM: PrkA serine protein kinase C-terminal domain.
  
     0.548
AGB33259.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1508).
  
     0.534
AGB32683.1
Phosphate uptake regulator; PFAM: PhoU domain; SpoVT / AbrB like domain.
  
     0.523
AGB31970.1
Hypothetical protein; PFAM: Glutamate-cysteine ligase family 2(GCS2).
  
     0.519
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.