Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32485.1PAS domain S-box; PFAM: HTH DNA binding domain; Phage integrase family; PAS fold; TIGRFAM: PAS domain S-box. (739 aa)    
Predicted Functional Partners:
AGB32208.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
  
    0.571
AGB32486.1
acetate--CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase.
       0.571
AGB32498.1
Hypothetical protein.
 
     0.552
AGB32437.1
Hypothetical protein.
  
     0.532
AGB30873.1
CARDB domain-containing protein; PFAM: CARDB.
  
     0.519
AGB30234.1
Putative integral membrane protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
 
    0.496
AGB31191.1
Hypothetical protein.
  
     0.491
AGB32483.1
TIGRFAM: putative solute:sodium symporter small subunit.
       0.486
AGB32481.1
PFAM: Universal stress protein family.
       0.464
AGB32484.1
acetate--CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase.
       0.448
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.