STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32518.1PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain. (746 aa)    
Predicted Functional Partners:
AGB32517.1
PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
 
  
 0.998
AGB32013.1
Hypothetical protein.
 
     0.921
AGB32516.1
PFAM: Precorrin-8X methylmutase.
 
   
 0.916
AGB32515.1
PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
 
  
 0.896
AGB33552.1
PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase.
  
  
 0.825
AGB33424.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
 
     0.790
AGB30988.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
  
 0.779
AGB33001.1
AICAR transformylase/IMP cyclohydrolase PurH; PFAM: AICARFT/IMPCHase bienzyme; Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent.
       0.764
AGB30385.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
       0.761
AGB32117.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; TIGRFAM: PGF-CTERM archaeal protein-sorting signal.
       0.761
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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