STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB32544.1Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily. (287 aa)    
Predicted Functional Partners:
AGB32543.1
PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
   
 0.847
AGB32545.1
PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
   
 0.718
atpF
Archaeal/vacuolar-type H+-ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 
 
 0.629
AGB30621.1
Hypothetical protein.
 
     0.629
atpC
ATP synthase A1, C subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.588
AGB30267.1
PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.
 
   
 0.568
AGB33160.1
Hypothetical protein.
 
     0.564
rpl6p
Archaeal ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.555
AGB32713.1
PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase, HisJ family.
 
    0.548
AGB30938.1
PFAM: Integral membrane protein DUF95.
  
    0.538
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.