STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32639.1Putative hydrolase or acyltransferase of alpha/beta superfamily. (312 aa)    
Predicted Functional Partners:
AGB32638.1
PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase.
       0.815
AGB32637.1
PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.
       0.606
AGB31139.1
PFAM: Calcineurin-like phosphoesterase.
 
 
  0.598
AGB33599.1
TIGRFAM: phosphoesterase, MJ0936 family.
   
  0.502
AGB30538.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.484
AGB33035.1
Alpha/beta hydrolase family protein.
 
 
 0.471
AGB32358.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
  0.463
mre11
DNA repair exonuclease; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity; Belongs to the MRE11/RAD32 family.
 
  
 0.459
AGB30994.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
  0.450
AGB30831.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.443
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.