STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGB32644.1Peptidase family protein; PFAM: M42 glutamyl aminopeptidase. (352 aa)    
Predicted Functional Partners:
AGB30369.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF).
   
  
 0.668
AGB32645.1
Hypothetical protein.
       0.524
AGB32642.1
Putative nucleic-acid-binding protein containing a Zn-ribbon; PFAM: DUF35 OB-fold domain.
       0.521
AGB32643.1
acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain.
       0.507
AGB31872.1
Putative membrane protein; PFAM: Rhomboid family; AN1-like Zinc finger.
     
 0.464
AGB30856.1
Small nuclear ribonucleoprotein; PFAM: LSM domain.
       0.429
AGB30854.1
PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase; uncharacterized protein, coenzyme F420 biosynthesis associated.
       0.428
AGB32216.1
PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family.
  
  
 0.414
AGB32646.1
Di-/tricarboxylate transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.
       0.413
AGB33204.1
Leucyl aminopeptidase (aminopeptidase T); PFAM: Thermophilic metalloprotease (M29).
 
  
 0.405
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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