STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32647.1PFAM: Acetyltransferase (GNAT) family. (155 aa)    
Predicted Functional Partners:
AGB32002.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.608
AGB30938.1
PFAM: Integral membrane protein DUF95.
  
    0.573
AGB32683.1
Phosphate uptake regulator; PFAM: PhoU domain; SpoVT / AbrB like domain.
  
    0.529
AGB32568.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
  
     0.499
AGB29994.1
Hypothetical protein.
  
     0.491
AGB31807.1
Insertion element protein.
  
     0.479
AGB31169.1
PFAM: Cytochrome C biogenesis protein transmembrane region.
  
     0.478
AGB30438.1
Insertion element protein.
  
     0.469
AGB31636.1
Insertion element protein.
  
     0.464
AGB32404.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; Eco57I restriction endonuclease.
 
     0.447
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.