Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB32746.1ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter. (257 aa)    
Predicted Functional Partners:
AGB32745.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.957
AGB31528.1
PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.688
AGB32029.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
 
  
 0.679
truD
tRNA pseudouridine synthase, TruD family; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
       0.574
AGB32744.1
PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family.
 
     0.552
AGB30073.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
  
 0.505
AGB31307.1
PFAM: CAAX amino terminal protease family.
  
  
 0.505
AGB33121.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
  
 0.505
AGB33411.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.481
AGB33412.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
  
  0.471
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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