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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB32794.1Putative hydrolase or acyltransferase of alpha/beta superfamily. (455 aa)    
Predicted Functional Partners:
AGB32793.1
PFAM: Acetoacetate decarboxylase (ADC).
       0.773
AGB33185.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.551
AGB31139.1
PFAM: Calcineurin-like phosphoesterase.
 
 
  0.483
AGB30831.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.480
AGB29971.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.464
AGB32322.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.454
AGB30079.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.453
AGB33566.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.444
AGB31243.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
 
 0.443
AGB30957.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.441
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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