STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB32807.1Thioredoxin reductase; PFAM: FAD binding domain. (245 aa)    
Predicted Functional Partners:
AGB33517.1
Cysteine desulfurase-like protein, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily.
 
 
  0.924
AGB31318.1
Cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.
  
 
 0.913
AGB30564.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
  
 
  0.912
AGB32808.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48.
  
    0.589
AGB30330.1
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; ThiF family.
  
    0.513
AGB30210.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
 
 
 0.492
AGB30373.1
Molybdopterin converting factor, large subunit; PFAM: MoaE protein.
  
  
 0.479
AGB32809.1
PFAM: Polyketide cyclase / dehydrase and lipid transport.
       0.479
AGB31359.1
PFAM: Thioredoxin; TIGRFAM: thioredoxin.
 
 
 0.469
AGB32985.1
Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
 
 
 0.418
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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