STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32826.1Putative membrane protein; PFAM: Protein of unknown function (DUF1616). (329 aa)    
Predicted Functional Partners:
AGB32825.1
Hypothetical protein.
       0.786
AGB30919.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
 
     0.631
AGB33402.1
Putative Zn-finger protein.
  
     0.617
AGB30252.1
PFAM: Uncharacterised protein family (UPF0146); Belongs to the UPF0146 family.
  
     0.616
AGB32063.1
PFAM: Protein of unknown function (DUF447).
  
     0.610
AGB31906.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: DHH family; OB-fold nucleic acid binding domain.
  
    0.575
AGB32060.1
TIGRFAM: TIM-barrel protein, putative.
  
     0.550
AGB32198.1
PFAM: HTH DNA binding domain.
  
     0.548
AGB33594.1
PFAM: Kinase binding protein CGI-121.
  
     0.541
AGB30587.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase.
  
     0.535
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.