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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB32834.1PFAM: Glycosyl transferase family 2. (352 aa)    
Predicted Functional Partners:
AGB32833.1
Hypothetical protein.
       0.774
AGB30905.1
PFAM: Glycosyl transferase family 2; TIGRFAM: glycosyltransferase, TIGR04182 family.
 
   
 0.615
AGB32832.1
PFAM: Glycosyl transferase family 2.
 
     0.589
AGB30668.1
PFAM: Glycosyl transferase family 2.
  
     0.539
AGB30919.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
 
 
 0.479
AGB31216.1
PFAM: NAD dependent epimerase/dehydratase family.
 
 
 0.454
AGB32822.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.452
AGB31217.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 
 0.443
AGB32677.1
PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase.
 
 
 0.438
AGB31182.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.426
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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