STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB32880.1Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family. (219 aa)    
Predicted Functional Partners:
AGB32881.1
Hypothetical protein.
       0.739
AGB31475.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.709
AGB30919.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
  
     0.691
AGB32784.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; archaeosortase A, PGF-CTERM-specific.
  
     0.673
AGB30052.1
PFAM: Protein of unknown function (DUF460).
  
     0.666
AGB30467.1
PFAM: ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
 
   
 0.664
AGB31321.1
Hypothetical protein; PFAM: RNA polymerase Rpb4.
  
     0.659
AGB32381.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.659
AGB31109.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.657
AGB31051.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.641
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.