STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32914.1K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain. (248 aa)    
Predicted Functional Partners:
AGB32913.1
Transcriptional regulator; PFAM: AsnC family.
  
    0.928
AGB32915.1
Transcriptional regulator; PFAM: AsnC family.
 
    0.769
AGB31921.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.721
AGB30557.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.718
AGB31584.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.713
AGB31587.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.713
AGB30129.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.709
trkA
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain.
 
   
 0.700
trkA-2
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain.
 
   
 0.694
trkA-3
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain.
 
   
 0.684
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.