STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32915.1Transcriptional regulator; PFAM: AsnC family. (76 aa)    
Predicted Functional Partners:
AGB32913.1
Transcriptional regulator; PFAM: AsnC family.
      
0.781
AGB32914.1
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain.
 
    0.769
AGB32058.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: plastocyanin.
 
     0.663
tmk
PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase.
  
    0.598
AGB32886.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.553
AGB30577.1
Hypothetical protein; PFAM: YqcI/YcgG family.
  
     0.517
AGB31072.1
Hypothetical protein.
  
     0.496
AGB32917.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family.
       0.434
AGB31662.1
PFAM: HTH DNA binding domain; GAF domain.
  
     0.427
AGB32113.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain; AsnC family.
 
 
 
 0.427
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.