STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB33068.1Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain. (638 aa)    
Predicted Functional Partners:
AGB30421.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
 
 
 0.618
AGB30382.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
 
 
 0.564
AGB31201.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
 
 
 0.564
cetZ-3
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
     
 0.557
AGB30910.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
 
 
 0.525
AGB32697.1
Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase.
 
  
 0.517
AGB30635.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
   
 0.491
AGB32831.1
Putative deacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; PKD domain.
  
    0.486
AGB30704.1
PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
  
 0.474
AGB30136.1
Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily.
 
  
 0.471
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.