STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB33073.1Exopolyphosphatase-like enzyme; PFAM: DHH family; DHHA1 domain. (395 aa)    
Predicted Functional Partners:
AGB33072.1
PFAM: NAD dependent epimerase/dehydratase family.
   
   0.862
AGB33070.1
Hypothetical protein.
       0.648
dacZ
Hypothetical protein; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation.
 
   
 0.492
AGB32871.1
PFAM: ScpA/B protein.
 
    0.454
AGB31956.1
PFAM: Protein of unknown function (DUF790).
 
     0.436
infB
Translation initiation factor aIF-2/yIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
  
    0.433
cetZ-3
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
     0.413
AGB33071.1
Sulfite oxidase-like oxidoreductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain.
       0.411
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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