STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB33102.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
AGB32813.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.685
AGB30462.1
Putative DHD superfamily phosphohydrolase.
  
     0.654
AGB33157.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
  
     0.654
AGB33104.1
Membrane protein implicated in regulation of membrane protease activity; PFAM: NfeD-like.
       0.648
AGB31980.1
PFAM: Membrane protein of unknown function DUF63.
  
     0.639
AGB31960.1
Hypothetical protein.
  
     0.636
AGB30323.1
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase; PFAM: TRAM domain.
  
     0.633
AGB33103.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
       0.628
atpE
Archaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.626
AGB31896.1
RecA-superfamily ATPase possibly involved in signal transduction.
  
     0.601
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.