Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB33117.1Kef-type K+ ransport system, predicted NAD-binding component; PFAM: TrkA-N domain; Ion channel. (394 aa)    
Predicted Functional Partners:
AGB33115.1
TrkA-like protein; PFAM: TrkA-C domain.
       0.631
AGB33116.1
TrkA-like protein; PFAM: TrkA-C domain.
       0.595
AGB33114.1
PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.
       0.550
AGB33367.1
NhaP-type Na+(K+)/H+ antiporter; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family.
 
   
 0.440
AGB32808.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48.
 
   
 0.413
AGB33324.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter.
   
    0.404
AGB32515.1
PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
   
    0.400
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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