STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGB33121.1Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family. (371 aa)    
Predicted Functional Partners:
pgi
PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
 
     0.789
AGB32029.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
 
  
 0.776
AGB30621.1
Hypothetical protein.
 
  
 0.613
AGB32013.1
Hypothetical protein.
   
    0.604
AGB31988.1
PFAM: Cytochrome oxidase assembly protein.
 
     0.555
AGB31528.1
PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.543
AGB32571.1
PFAM: PBS lyase HEAT-like repeat.
 
  
 0.531
AGB32784.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; archaeosortase A, PGF-CTERM-specific.
  
    0.531
AGB30250.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548.
 
    0.523
AGB32072.1
Flavin-dependent dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
    0.515
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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