STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB33155.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
AGB33157.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
 
     0.871
AGB33156.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
     
 0.821
AGB33154.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.807
AGB33153.1
PFAM: Glycosyl transferase family 2.
       0.779
AGB32554.1
PFAM: Trm112p-like protein.
  
    0.655
AGB33256.1
Hypothetical protein.
  
     0.615
AGB32813.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.613
AGB31051.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.602
AGB30015.1
Leader peptidase family protein; PFAM: Archaeal Peptidase A24 C-terminus Type II; Type IV leader peptidase family.
 
   
 0.584
AGB31475.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.582
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.