STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB33157.1Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153). (239 aa)    
Predicted Functional Partners:
AGB33156.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
  
    0.887
AGB33155.1
Hypothetical protein.
 
     0.871
AGB31475.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.747
AGB32176.1
Hypothetical protein.
  
     0.720
AGB32813.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.716
AGB31980.1
PFAM: Membrane protein of unknown function DUF63.
  
     0.713
AGB30919.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
  
     0.689
AGB30052.1
PFAM: Protein of unknown function (DUF460).
  
     0.682
AGB30462.1
Putative DHD superfamily phosphohydrolase.
  
     0.659
AGB33158.1
Putative RNA-binding protein, contains TRAM domain; PFAM: TRAM domain.
       0.659
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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