STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB33177.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
AGB33176.1
Hypothetical protein.
 
   
 0.988
AGB31032.1
Single-stranded DNA-binding protein.
 
   
 0.848
AGB29953.1
PFAM: Peptidase S24-like.
  
     0.748
AGB29954.1
PFAM: Peptidase S24-like.
  
     0.748
AGB30759.1
PFAM: Uncharacterized protein conserved in archaea (DUF2240).
  
     0.735
AGB32120.1
PFAM: Protein of unknown function (DUF1119).
  
     0.727
AGB33067.1
Putative coiled-coil protein.
  
     0.724
AGB32261.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.718
AGB30919.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
  
     0.714
AGB32556.1
Hypothetical protein; Manually curated.
  
     0.710
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.