close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB33351.1PFAM: Proline dehydrogenase. (279 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.938
AGB30684.1
PFAM: Proline dehydrogenase.
  
  
 
0.902
AGB33349.1
PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.830
AGB30515.1
PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.721
AGB30654.1
PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II.
 
  
 0.695
AGB31717.1
PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.682
AGB33353.1
PFAM: Aldehyde dehydrogenase family.
  
 
 0.595
AGB30976.1
PFAM: Carbon starvation protein CstA.
   
  
 0.572
AGB31374.1
Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase.
   
 
 0.570
AGB33352.1
PFAM: HTH DNA binding domain.
       0.566
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.