Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB33411.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (337 aa)    
Predicted Functional Partners:
AGB33412.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
 0.958
AGB33413.1
Hypothetical protein.
       0.592
AGB33410.1
Zn-dependent protease; PFAM: CBS domain; Peptidase family M50; Belongs to the peptidase M50B family.
   
   0.591
AGB33194.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
  
 0.576
AGB31368.1
Nitrous oxidase accessory protein; PFAM: NosL; TIGRFAM: parallel beta-helix repeat (two copies).
  
  
 0.483
AGB32746.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
  
 0.481
AGB30721.1
Hypothetical protein.
  
 
 0.433
rpl2p
Ribosomal protein L2, bacterial/organellar; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
   0.432
AGB30111.1
Hypothetical protein.
  
 
 0.431
AGB30410.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.431
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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