STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB33596.1Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. (232 aa)    
Predicted Functional Partners:
AGB32829.1
PFAM: Asparagine synthase.
  
   
 0.672
AGB32830.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
     0.662
AGB32626.1
PFAM: Arylsulfotransferase (ASST).
  
     0.608
AGB31180.1
PFAM: FemAB family.
  
     0.582
AGB32006.1
PFAM: Arylsulfotransferase (ASST).
  
     0.571
AGB31607.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.564
AGB33165.1
Hypothetical protein; PFAM: Iron-binding zinc finger CDGSH type.
 
    0.561
AGB32440.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
     0.558
AGB32674.1
Hypothetical protein.
  
     0.548
AGB31202.1
Putative methicillin resistance protein; PFAM: FemAB family.
  
     0.540
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.