STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ71483.1PFAM: HTH DNA binding domain. (223 aa)    
Predicted Functional Partners:
AFZ74442.1
Mn2+-dependent serine/threonine protein kinase; PFAM: RIO1 family.
  
     0.681
AFZ74164.1
PFAM: HTH DNA binding domain.
  
     0.654
AFZ74069.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.576
AFZ71668.1
PFAM: HTH DNA binding domain.
  
     0.567
AFZ73234.1
Putative metal-dependent phosphoesterase, PHP family.
  
     0.565
AFZ74811.1
PFAM: HTH DNA binding domain.
  
     0.559
AFZ71757.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
  
     0.550
AFZ72087.1
PFAM: Protein of unknown function (DUF2797).
  
     0.533
AFZ73332.1
Hypothetical protein.
  
     0.522
AFZ71482.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
 
     0.506
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.