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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ71703.1Putative transcriptional regulator containing CBS domains; PFAM: CBS domain; ParB-like nuclease domain. (268 aa)    
Predicted Functional Partners:
AFZ73140.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.851
AFZ73914.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.851
cetZ-5
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
 
 0.546
AFZ73391.1
birA, biotin-(acetyl-CoA-carboxylase) ligase; PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain.
  
  
 0.540
AFZ72737.1
PFAM: Helix-turn-helix; DNA methylase.
  
  
 0.534
AFZ73808.1
PFAM: Proliferating cell nuclear antigen, N-terminal domain.
 
   
 0.530
cetZ-6
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
 
 0.516
cetZ-4
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
 
 0.512
cetZ-3
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
 
 0.500
cetZ
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
 
 0.491
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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