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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ71809.1ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter. (257 aa)    
Predicted Functional Partners:
AFZ71808.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.935
AFZ71949.1
PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain.
 
  
 0.688
AFZ73975.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
 
  
 0.674
AFZ74232.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
 
  
 0.611
AFZ72869.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.565
AFZ72971.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
 
  
 0.542
AFZ72870.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
  
  0.517
AFZ72916.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.515
AFZ72619.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.508
AFZ71709.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.506
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.