STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ71890.1PFAM: Vitamin K epoxide reductase family. (211 aa)    
Predicted Functional Partners:
AFZ72971.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
     0.462
AFZ72317.1
Hypothetical protein.
  
     0.454
AFZ74101.1
Hypothetical protein.
  
     0.446
AFZ74770.1
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing; PFAM: UvrD/REP helicase.
  
     0.419
AFZ72471.1
Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit.
     
 0.413
AFZ72355.1
PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.
 
     0.407
AFZ71921.1
Protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain.
 
  
 0.405
AFZ73554.1
Nitrous oxidase accessory protein; PFAM: NosL.
       0.405
AFZ73564.1
Nitrous oxidase accessory protein; PFAM: NosL.
       0.405
AFZ74134.1
Hypothetical protein.
 
   
 0.404
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.