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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ71950.1Putative hydrolase of the alpha/beta superfamily. (209 aa)    
Predicted Functional Partners:
AFZ74684.1
Putative phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
     0.976
AFZ71951.1
Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.775
AFZ71695.1
PFAM: Uncharacterized conserved protein (DUF2267).
 
     0.499
AFZ73816.1
PFAM: Archease protein family (DUF101/UPF0211).
 
    0.492
AFZ71952.1
Hypothetical protein.
       0.453
AFZ72330.1
PFAM: Uncharacterized conserved protein (DUF2267).
 
     0.416
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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