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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72169.1Protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (205 aa)    
Predicted Functional Partners:
dcd
Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP.
  
    0.629
grxC
Glutaredoxin, GrxC family; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin, GrxC family.
  
  
 0.573
pth2
PFAM: Peptidyl-tRNA hydrolase PTH2; TIGRFAM: peptidyl-tRNA hydrolase.
       0.550
AFZ74135.1
PFAM: Redoxin.
 
 
 0.466
AFZ74258.1
Thiol:disulfide interchange protein; PFAM: Protein of unknown function, DUF255.
 
 
 0.434
AFZ72228.1
PFAM: Protein of unknown function (DUF541); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
     0.433
AFZ74267.1
ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein.
 
  
 0.412
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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