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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72303.1PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3. (641 aa)    
Predicted Functional Partners:
AFZ74291.1
Putative glycerate kinase; PFAM: MOFRL family.
     
  0.900
AFZ74429.1
PFAM: Polysulphide reductase, NrfD.
  
   
 0.657
AFZ72293.1
PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.
 
     0.635
AFZ74331.1
ABC-type tungstate transport system, permease component.
 
   
 0.619
AFZ73681.1
PFAM: Polysulphide reductase, NrfD.
      
 0.604
AFZ72316.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
      
 0.602
AFZ72382.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
      
 0.602
AFZ73542.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
      
 0.602
AFZ74284.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
      
 0.602
AFZ74360.1
PFAM: CoA binding domain; ATP-grasp domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain.
    
 
 0.589
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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