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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaIPFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit. (304 aa)    
Predicted Functional Partners:
AFZ72469.1
Putative enzyme of phenylacetate metabolism; PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit.
 
  
  0.995
paaA
Hypothetical protein; PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit.
 
  
 
0.987
paaD
Phenylacetic acid degradation protein PaaD; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD.
 
 
 0.984
AFZ72460.1
Coenzyme F390 synthetase; PFAM: AMP-binding enzyme.
 
 
 0.964
AFZ72471.1
Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.944
AFZ72785.1
enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family.
 
 
 0.939
AFZ72472.1
Hypothetical protein.
 
     0.899
AFZ74252.1
Flavodoxin reductase family protein; PFAM: Oxidoreductase FAD-binding domain.
 
 
 0.571
AFZ72467.1
PFAM: HTH DNA binding domain.
       0.567
AFZ72939.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S].
 
 
 0.564
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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