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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72549.1Hypothetical protein. (576 aa)    
Predicted Functional Partners:
AFZ72548.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
     0.923
AFZ72545.1
Putative ATPase; PFAM: Domain of unknown function DUF87.
 
     0.899
AFZ72546.1
Hypothetical protein.
       0.836
AFZ72547.1
Hypothetical protein.
       0.833
AFZ72550.1
Hypothetical protein.
       0.735
AFZ72551.1
Hypothetical protein.
       0.735
AFZ72552.1
Hypothetical protein.
       0.735
AFZ72553.1
Hypothetical protein.
       0.735
AFZ74453.1
PFAM: Domain of unknown function DUF87.
  
     0.639
AFZ71595.1
Hypothetical protein; PFAM: Uncharacterized ACR, COG1430; manually curated.
  
     0.595
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.