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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72566.1Putative membrane protein; PFAM: Bacterial membrane flanked domain. (144 aa)    
Predicted Functional Partners:
AFZ71286.1
Hypothetical protein; PFAM: Bacterial membrane flanked domain.
 
  
 0.756
cobN
PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
    0.523
sppA
PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
   
    0.456
AFZ73595.1
ClpP class periplasmic serine protease; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
   
    0.456
lipA
Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.437
AFZ73144.1
Hypothetical protein.
  
     0.428
AFZ74215.1
PFAM: Gas vesicle synthesis protein GvpO.
  
     0.414
AFZ73258.1
PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase; uncharacterized protein, coenzyme F420 biosynthesis associated.
 
    0.413
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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