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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72780.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (251 aa)    
Predicted Functional Partners:
AFZ72781.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.998
AFZ71316.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 
 0.785
AFZ71315.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 
 0.783
AFZ72655.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
    
0.700
AFZ72530.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
   
0.648
AFZ72041.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
    
0.639
AFZ72779.1
PFAM: Peptidase S24-like.
  
  
 0.624
AFZ71881.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.585
AFZ74446.1
Hypothetical protein.
   
 
 0.585
AFZ74723.1
Hypothetical protein.
   
 
 0.585
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.