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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72802.1PFAM: Zn-ribbon containing protein (DUF2072). (317 aa)    
Predicted Functional Partners:
AFZ72801.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073).
 
   
 0.953
AFZ72800.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
 
   
 0.937
AFZ71599.1
Putative acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); Protein of unknown function, DUF583.
  
     0.737
artA
Archaeosortase A, PGF-CTERM-specific; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; archaeosortase A, PGF-CTERM-specific.
  
     0.734
AFZ71463.1
PFAM: Membrane protein of unknown function DUF63.
  
     0.733
AFZ72938.1
Leader peptidase family protein; PFAM: Archaeal Peptidase A24 C-terminus Type II; Type IV leader peptidase family.
  
     0.723
AFZ74810.1
PFAM: Protein of unknown function (DUF552).
  
     0.702
AFZ73169.1
Hypothetical protein.
  
     0.699
AFZ73422.1
PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
  
     0.693
AFZ74820.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.693
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.