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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72870.1ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter. (270 aa)    
Predicted Functional Partners:
AFZ72869.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.962
AFZ74232.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
  
 0.658
AFZ71949.1
PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain.
  
  
 0.637
AFZ73975.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
  
 0.599
AFZ71808.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.588
AFZ72868.1
Zn-dependent protease; PFAM: CBS domain; Peptidase family M50; Belongs to the peptidase M50B family.
       0.538
AFZ71709.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.529
AFZ72619.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.528
AFZ72916.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.525
AFZ74720.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.522
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.