STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ72972.1PAS domain S-box; PFAM: HTH DNA binding domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box. (1517 aa)    
Predicted Functional Partners:
AFZ74518.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
 
  
0.904
AFZ72305.1
PAS domain S-box; PFAM: HTH DNA binding domain; PAS fold; TIGRFAM: PAS domain S-box.
 
  
0.776
AFZ72185.1
PAS domain S-box; PFAM: HTH DNA binding domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box.
 
  
0.749
AFZ72837.1
Hypothetical protein.
 
  
 0.633
AFZ74896.1
PAS domain S-box; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.607
AFZ72432.1
PFAM: FIST C domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; FIST N domain.
 
 
 
 0.604
AFZ72971.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
 
     0.557
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
   
 0.537
AFZ71764.1
Methylase of chemotaxis methyl-accepting protein; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
 
   
 0.534
AFZ72974.1
TIGRFAM: PAS domain S-box.
 
     0.508
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.