STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73034.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
AFZ73035.1
Uncharacterized protein, linocin/CFP29; PFAM: Encapsulating protein for peroxidase.
       0.784
AFZ73033.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2213).
       0.779
AFZ73036.1
Hypothetical protein.
       0.773
AFZ73037.1
Hypothetical protein.
       0.773
AFZ73038.1
Hypothetical protein.
       0.553
AFZ73032.1
PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.
       0.506
AFZ73028.1
Hypothetical protein.
       0.495
AFZ73029.1
PFAM: Transposase.
       0.495
AFZ73030.1
PFAM: Terminase-like family; TIGRFAM: phage terminase, large subunit, PBSX family.
       0.495
AFZ73031.1
PFAM: Protein of unknown function (DUF1073).
       0.495
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.