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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73127.1Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain. (558 aa)    
Predicted Functional Partners:
AFZ73133.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
  
 0.967
AFZ73125.1
PFAM: Flagella accessory protein C (FlaC); Archaeal flagella protein.
 
  
 0.942
AFZ73132.1
Putative ATPase involved in flagella biogenesis; PFAM: KaiC.
 
  
 0.911
AFZ73118.1
Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.821
AFZ71756.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
  
 0.808
AFZ73130.1
PFAM: Flagella accessory protein C (FlaC); Archaeal flagella protein.
  
  
 0.789
AFZ73124.1
Putative archaeal flagellar protein G; PFAM: Archaebacterial flagellin.
  
  
 0.749
AFZ73123.1
Putative archaeal flagellar protein F.
  
  
 0.722
trmY
Hypothetical protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
  
    0.630
AFZ72548.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
  
 0.625
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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