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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73142.1Chemotaxis signal transduction protein; PFAM: CheW-like domain. (144 aa)    
Predicted Functional Partners:
AFZ72429.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.968
AFZ73307.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.965
AFZ73137.1
Chemotaxis protein histidine kinase-like protein; PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.
 
 
 0.962
AFZ71768.1
Chemotaxis protein histidine kinase-like protein; PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.
 
 
 0.959
AFZ71596.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.953
AFZ74674.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.953
AFZ72113.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.951
AFZ72996.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.951
AFZ72432.1
PFAM: FIST C domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; FIST N domain.
 
 0.950
AFZ72855.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 0.950
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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