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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73170.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
AFZ73171.1
Putative membrane protein; PFAM: Domain of unknown function (DUF373).
 
     0.860
AFZ72759.1
PFAM: Protein of unknown function DUF54; Belongs to the UPF0201 family.
  
     0.661
AFZ74658.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.661
AFZ71906.1
Putative membrane protein; PFAM: Domain of unknown function (DUF373).
 
     0.633
AFZ72282.1
PFAM: PUA domain; Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; uncharacterized domain 2.
  
     0.630
AFZ72859.1
Putative Zn-finger protein.
  
     0.591
AFZ73808.1
PFAM: Proliferating cell nuclear antigen, N-terminal domain.
  
     0.585
AFZ74834.1
PFAM: Uncharacterized protein conserved in archaea (DUF2240).
  
     0.585
AFZ73584.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50.
 
     0.579
AFZ72692.1
NMD protein affecting ribosome stability and mRNA decay; PFAM: NMD3 family.
  
     0.575
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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