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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73238.1Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. (765 aa)    
Predicted Functional Partners:
AFZ73236.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.939
AFZ73237.1
PFAM: Protein of unknown function DUF58.
 
     0.918
AFZ72463.1
PFAM: Branched-chain amino acid transport system / permease component.
  
  
 0.791
AFZ72120.1
PFAM: Branched-chain amino acid transport system / permease component.
 
  
 0.743
AFZ72672.1
Ammonia permease; PFAM: Ammonium Transporter Family; Nitrogen regulatory protein P-II; TIGRFAM: ammonium transporter; Belongs to the P(II) protein family.
  
  
 0.705
AFZ72464.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
  
  
 0.687
AFZ72121.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
  
  
 0.669
AFZ73705.1
Hypothetical protein; PFAM: Domain of unknown function DUF11; Protein of unknown function DUF58.
 
  
 0.663
AFZ73306.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
  
 0.653
AFZ72123.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
  
 0.628
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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