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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73275.1PFAM: von Willebrand factor type A domain. (399 aa)    
Predicted Functional Partners:
AFZ71380.1
PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.
  
 
 0.937
AFZ73276.1
PFAM: Protein kinase domain; FHA domain.
 
 
 0.911
AFZ73277.1
PFAM: Protein phosphatase 2C; FHA domain.
 
     0.818
AFZ73274.1
Primosomal protein N' (replication factor Y) - superfamily II helicase; PFAM: FHA domain.
 
  
 0.801
cobN
PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
 
 0.706
AFZ72732.1
PFAM: Tetratricopeptide repeat.
 
   
 0.539
AFZ72569.1
Conserved repeat protein; PFAM: Domain of unknown function DUF11; Protein of unknown function DUF58; TIGRFAM: conserved repeat domain.
 
  
 0.526
AFZ74764.1
Hypothetical protein.
  
 
 0.502
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.497
AFZ73705.1
Hypothetical protein; PFAM: Domain of unknown function DUF11; Protein of unknown function DUF58.
 
  
 0.472
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.