Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFZ73303.1PFAM: Polysulphide reductase, NrfD. (444 aa)    
Predicted Functional Partners:
AFZ71959.1
Fe-S-cluster-containing hydrogenase subunit.
 
 
 0.899
AFZ71524.1
Fe-S-cluster-containing hydrogenase subunit.
 
 
 0.898
AFZ73680.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
 
 0.849
AFZ74430.1
Fe-S-cluster-containing hydrogenase subunit.
 
 
 0.835
AFZ73679.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain.
 
 
 0.769
AFZ71662.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
 
 0.743
AFZ73453.1
Fe-S-cluster-containing hydrogenase subunit.
 
 
 0.739
AFZ71803.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
 
 0.736
AFZ73304.1
Hypothetical protein.
       0.732
AFZ74431.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 
 0.701
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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