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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73354.1Putative membrane protein; PFAM: Protein of unknown function (DUF420). (187 aa)    
Predicted Functional Partners:
AFZ71402.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.576
AFZ73581.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; Chlorite dismutase.
 
    0.548
AFZ73966.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
  
     0.476
AFZ74467.1
SCO family protein; PFAM: SCO1/SenC.
 
  
 0.452
AFZ73965.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
  
     0.424
AFZ73968.1
PFAM: SpoVR like protein.
  
     0.424
AFZ73542.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.421
AFZ73312.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1405).
  
     0.412
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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