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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73524.1PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. (295 aa)    
Predicted Functional Partners:
AFZ73525.1
Hypothetical protein.
       0.570
moaA
Putative molybdenum cofactor biosynthesis protein A, archaeal; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
    0.552
AFZ72244.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
 
    0.549
AFZ72704.1
DNA helicase, Rad3; PFAM: DEAD_2.
 
   
 0.549
AFZ71980.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.506
phhB
PFAM: Pterin 4 alpha carbinolamine dehydratase.
 
  
 0.501
AFZ73348.1
Putative Fe-S protein; PFAM: MOSC N-terminal beta barrel domain; MOSC domain.
  
     0.500
cetZ-6
Cell division GTPase; Involved in cell shape control; Belongs to the CetZ family.
       0.485
AFZ74361.1
Protein with phosphotransacetylase BioD-like N-terminal domain; PFAM: DRTGG domain.
  
  
 0.466
AFZ73521.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain.
       0.447
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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