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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73768.1PFAM: DSBA-like thioredoxin domain. (399 aa)    
Predicted Functional Partners:
AFZ73769.1
Hypothetical protein.
       0.773
AFZ72770.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
  
    0.544
AFZ74881.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
  
    0.544
AFZ73312.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1405).
  
     0.490
AFZ72492.1
Phosphoglycerol geranylgeranyltransferase, putative; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
  
     0.475
AFZ73281.1
NhaP-type Na+(K+)/H+ antiporter; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain.
   
   0.473
AFZ74281.1
NhaP-type Na+(K+)/H+ antiporter; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family.
   
   0.473
AFZ74267.1
ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein.
     
 0.461
AFZ73265.1
Phosphoglycerol geranylgeranyltransferase, putative; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
  
     0.431
AFZ71841.1
PFAM: PcrB family; TIGRFAM: geranylgeranylglyceryl phosphate synthase family protein.
  
     0.428
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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